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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195256840_195258493_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195256840 - 195258493

Intron Length:

1654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTTA

5'SS Class:

major

3'SS Sequence:

GTTTTTTAAGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TGTTTTTTAAGC

Flanking Amino Acid:

VPIQENKAPISSGTRRAVSN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

68.7

38.5

Major BPS

87.3

0.93

0.8

36.5

Major PPT

77.2

0.61

74.8

Minor 5ss

39.3

-1.2

3.5

55.9

48.2

Minor BPS

66.6

0.5

1.6

74.15

36.9

Associated Gene:

Gene:

CKAP2

Ensembl Gene ID:

ENSAPLG00000005260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005431

195248745 - 195260824

12080