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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195272321_195272422_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195272321 - 195272422

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TCTTTCTTGATA

Flanking Amino Acid:

FEDLSKLMEKAKEMVELSKS

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.7

40.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

78.3

0.64

0.9

76.3

32.4

Minor 5ss

37.1

-1.5

3.3

49.6

Minor BPS

74.3

0.76

1.1

77.25

33.8

Associated Gene:

Gene:

VPS36

Ensembl Gene ID:

ENSAPLG00000004957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005150

195261086 - 195277906

16821