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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195273025_195273892_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195273025 - 195273892

Intron Length:

868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTAC

5'SS Class:

strong_major

3'SS Sequence:

TGTACTTACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TTTCTCTTACCA

Flanking Amino Acid:

LAGMLQTPLEERGGIMSLTE

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.4

33.3

Major BPS

0.6

1.2

75.9

36.3

Major PPT

70.9

0.47

65.2

40.2

Minor 5ss

36.4

-1.5

3.4

49.2

47.3

Minor BPS

69.3

0.6

1.6

80.35

35.4

Associated Gene:

Gene:

VPS36

Ensembl Gene ID:

ENSAPLG00000004957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005150

195261086 - 195277906

16821