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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195275226_195277512_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195275226 - 195277512

Intron Length:

2287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTATGTGAA

5'SS Class:

major

3'SS Sequence:

TTGTTTCTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GTTTGTTTATTT

Flanking Amino Acid:

EEMVASALETVSEKGSLTAD

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

64.4

35.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

75.2

0.57

73.1

37.4

Minor 5ss

40.3

-1.1

3.1

53.6

44.8

Minor BPS

54.6

0.22

76.04

41.4

Associated Gene:

Gene:

VPS36

Ensembl Gene ID:

ENSAPLG00000004957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005150

195261086 - 195277906

16821