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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195277590_195277672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195277590 - 195277672

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTGTCCTCAACT

Flanking Amino Acid:

VGMSVLLAKERLLLAEKMGH

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

79.8

35.1

Major BPS

77.9

0.69

0.8

75.9

Major PPT

78.5

0.64

0.8

77.2

31.6

Minor 5ss

41.1

-1

2.9

57.5

46.8

Minor BPS

79.7

1.01

1.4

92.53

36.3

Associated Gene:

Gene:

VPS36

Ensembl Gene ID:

ENSAPLG00000004957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005150

195261086 - 195277906

16821