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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195340477_195341093_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195340477 - 195341093

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATC

5'SS Class:

strong_major

3'SS Sequence:

ACTATTGCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAC

U12 Branch Point Sequence:

CTACTCTGAACT

Flanking Amino Acid:

KQSFYRNPIKEVARFLDTKH

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

81.4

30.4

Major BPS

72.7

0.56

0.9

63.4

35.2

Major PPT

68.5

0.42

0.9

61.8

39.4

Minor 5ss

37.4

-1.4

3.2

51.9

44.9

Minor BPS

62.1

0.46

1.5

75.08

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004561

195330549 - 195347642

17094