Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_195341155_195341374_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195341155 - 195341374

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

ATTTTCTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCAGAT

U12 Branch Point Sequence:

TTTTCTTTATAG

Flanking Amino Acid:

ADHYKVYNLCSEKGYDPKYF

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.9

39.9

Major BPS

61.5

0.29

1.1

56.9

40.5

Major PPT

85.9

0.81

0.7

81.1

30.2

Minor 5ss

41.5

-0.9

2.8

57.1

41.1

Minor BPS

0.3

1.8

72.46

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004561

195330549 - 195347642

17094