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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195341457_195341539_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195341457 - 195341539

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTCCTCTTATCT

Flanking Amino Acid:

FIDDHNVPTIRDMLKFTASV

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

78.2

37.9

Major BPS

79.1

0.72

69.3

38.4

Major PPT

75.8

0.58

0.8

69.4

35.9

Minor 5ss

35.2

-1.7

3.2

51.1

45.2

Minor BPS

65.4

0.56

1.6

80.81

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004561

195330549 - 195347642

17094