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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195353339_195353618_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
195353339 - 195353618

Intron Length:
280

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAAGTATA

5'SS Class:
strong_major

3'SS Sequence:
ATCTCTCTACCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTCAG

U12 Branch Point Sequence:
GCATCACTAACT

Flanking Amino Acid:
QLSGKIVQGQNTVWSVVKSV

Intron Amino Acid Position:
151

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.8
0.91
0.8
89.9
22.1

Major BPS
68.2
0.45
1.5
77.7
37.1

Major PPT
74.1
0.54
0.9
67
38.6

Minor 5ss
41
-1
2.8
51.7
39.1

Minor BPS
53.1
0.18
2
72.09
43.9

Associated Gene:

Gene:
SLC25A15

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

195350784 - 195362239
11456