Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_195360694_195362126_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

195360694 - 195362126

Intron Length:

1433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTTTGCTTTATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.2

34.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

85.6

0.8

0.7

80.6

31.5

Minor 5ss

31.9

-2.1

3.3

41.7

44.9

Minor BPS

62.3

0.38

2.1

79.05

37.5

Associated Gene:

Gene:

SLC25A15

Ensembl Gene ID:

ENSAPLG00000004206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004325

195350784 - 195362239

11456