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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195778425_195780321_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195778425 - 195780321

Intron Length:

1897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCATA

5'SS Class:

strong_major

3'SS Sequence:

CTTAAAATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATTTTATAAATA

Flanking Amino Acid:

DKRLEMLQFQIEAHLDTLIN

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

83.2

30.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

72.3

0.5

67.3

42.4

Minor 5ss

37.5

-1.4

48.1

47.6

Minor BPS

54.5

0.14

1.9

70.26

36.2

Associated Gene:

Gene:

COG6

Ensembl Gene ID:

ENSAPLG00000008942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009355

195771043 - 195821153

50111