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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195794335_195798673_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195794335 - 195798673

Intron Length:

4339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTACTA

5'SS Class:

major

3'SS Sequence:

GCTTTAACTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CTTGCTTTAACT

Flanking Amino Acid:

EAMLKLVTIQGVEENIQEVV

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

64.5

41.5

Major BPS

0.62

1.4

85.7

34.9

Major PPT

70.1

0.45

0.9

63.2

37.4

Minor 5ss

34.2

-1.8

3.4

47.8

47.7

Minor BPS

77.1

0.93

1.3

87.23

Associated Gene:

Gene:

COG6

Ensembl Gene ID:

ENSAPLG00000008942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009355

195771043 - 195821153

50111