Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_195798766_195798870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195798766 - 195798870

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGTAC

5'SS Class:

major

3'SS Sequence:

TGTCTTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAC

U12 Branch Point Sequence:

TTACACAGAAAT

Flanking Amino Acid:

PIEMHSHDPLRYVGDMLAWL

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

38.1

Major BPS

72.8

0.57

30.3

Major PPT

77.5

0.62

0.9

77.1

37.1

Minor 5ss

-1.6

3.4

49.9

46.7

Minor BPS

45.3

-0.2

1.9

67.68

41.5

Associated Gene:

Gene:

COG6

Ensembl Gene ID:

ENSAPLG00000008942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009355

195771043 - 195821153

50111