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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195802723_195803820_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195802723 - 195803820

Intron Length:

1098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGACTA

5'SS Class:

major

3'SS Sequence:

TGTTATTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TGTTATTTTATA

Flanking Amino Acid:

SYERLYRWTQNECRTLTQES

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

65.4

40.6

Major BPS

74.2

0.6

39.4

Major PPT

0.72

0.8

76.7

37.2

Minor 5ss

35.9

-1.6

3.5

47.6

42.4

Minor BPS

54.4

0.13

1.8

68.67

37.4

Associated Gene:

Gene:

COG6

Ensembl Gene ID:

ENSAPLG00000008942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009355

195771043 - 195821153

50111