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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195803892_195804122_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195803892 - 195804122

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATCATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATTTTTATCA

Flanking Amino Acid:

ILLRTNQQRAGLEIMEQMAL

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

81.3

32.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.9

0.65

0.9

74.9

34.8

Minor 5ss

32.7

-2

3.4

40.8

45.4

Minor BPS

61.6

0.36

1.5

69.92

36.4

Associated Gene:

Gene:

COG6

Ensembl Gene ID:

ENSAPLG00000008942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009355

195771043 - 195821153

50111