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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195804206_195805784_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195804206 - 195805784

Intron Length:

1579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTCAG

5'SS Class:

strong_major

3'SS Sequence:

TGTATTGGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TACTTCTTGACC

Flanking Amino Acid:

RGTKDEPITEDFFKALGRVK

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

1.1

68.8

43.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

67.8

0.4

1.1

65.9

45.2

Minor 5ss

39.1

-1.2

2.9

49.5

46.7

Minor BPS

72.6

0.69

1.2

74.02

Associated Gene:

Gene:

COG6

Ensembl Gene ID:

ENSAPLG00000008942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009355

195771043 - 195821153

50111