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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195805897_195817173_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195805897 - 195817173

Intron Length:

11277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTATG

5'SS Class:

major

3'SS Sequence:

TTTTTTATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTG

Flanking Amino Acid:

IVKTTKLQAENQRLEMKAQV

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

77.2

37.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.3

0.97

0.7

89.4

25.4

Minor 5ss

47.1

-0.3

2.5

59.8

38.9

Minor BPS

63.6

0.29

1.6

70.13

38.1

Associated Gene:

Gene:

COG6

Ensembl Gene ID:

ENSAPLG00000008942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009355

195771043 - 195821153

50111