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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195817233_195818973_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195817233 - 195818973

Intron Length:

1741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATAT

5'SS Class:

strong_major

3'SS Sequence:

AATTGTATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATGATTCTAATT

Flanking Amino Acid:

CCEDMSSRLKAAKEQTQDLI

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

79.6

29.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

69.6

0.44

60.1

45.1

Minor 5ss

39.7

-1.2

3.1

56.3

47.9

Minor BPS

49.7

0.06

1.6

38.3

Associated Gene:

Gene:

COG6

Ensembl Gene ID:

ENSAPLG00000008942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009355

195771043 - 195821153

50111