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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195839382_195958522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195839382 - 195958522

Intron Length:

119141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAA

U12 Branch Point Sequence:

CTTGTGTAAACT

Flanking Amino Acid:

RVAGGIQFLGGLLIGSGCAL

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

57.5

0.19

1.4

61.7

43.1

Major PPT

82.4

0.73

0.8

77.7

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

46.7

-0.1

2.4

70.32

47.1

Associated Gene:

Gene:

LHFPL6

Ensembl Gene ID:

ENSAPLG00000008890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009241

195838820 - 195972779

133960