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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196097517_196098024_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196097517 - 196098024

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCAAG

5'SS Class:

strong_major

3'SS Sequence:

AATCTTACTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTTTTTTAATC

Flanking Amino Acid:

SSVWITDVGAGKYGHTVKQY

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

70.6

41.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.3

0.57

0.9

71.5

38.5

Minor 5ss

44.8

-0.6

2.6

56.4

Minor BPS

0.64

1.1

71.5

34.3

Associated Gene:

Gene:

NHLRC3

Ensembl Gene ID:

ENSAPLG00000016861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037498

196092214 - 196100880

8667