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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196099348_196100167_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196099348 - 196100167

Intron Length:

820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCGGG

5'SS Class:

major

3'SS Sequence:

TTTGTATTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TATTTTTGTATT

Flanking Amino Acid:

VLLGLIGGSQVLKAFDYFYP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

45.2

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

0.63

77.7

40.6

Minor 5ss

28.9

-2.4

3.5

37.3

47.4

Minor BPS

0.11

1.7

73.08

38.4

Associated Gene:

Gene:

NHLRC3

Ensembl Gene ID:

ENSAPLG00000016861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037498

196092214 - 196100880

8667