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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196104195_196104922_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196104195 - 196104922

Intron Length:

728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

ATATACATAAAA

Flanking Amino Acid:

YVHGYFSSEQVVELLRYFSW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

75.7

32.1

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

0.88

0.8

84.5

30.4

Minor 5ss

34.3

-1.8

3.6

49.9

46.6

Minor BPS

0.03

1.9

66.8

38.3

Associated Gene:

Gene:

PROSER1

Ensembl Gene ID:

ENSAPLG00000003606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044115

196100901 - 196121422

20522

ENSAPLT00000003707

196100901 - 196118748

17848