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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196104992_196105436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196104992 - 196105436

Intron Length:

445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCTTGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTATATTTACTT

Flanking Amino Acid:

QLKAIKALQHKIVAVPASKM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.5

28.7

Major BPS

79.2

0.73

75.3

39.4

Major PPT

74.6

0.55

73.4

41.9

Minor 5ss

45.3

-0.5

2.8

64.3

39.9

Minor BPS

58.2

0.33

1.8

77.42

39.4

Associated Gene:

Gene:

PROSER1

Ensembl Gene ID:

ENSAPLG00000003606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044115

196100901 - 196121422

20522

ENSAPLT00000003707

196100901 - 196118748

17848