Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_196108701_196109597_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196108701 - 196109597

Intron Length:

897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTATGTGTA

5'SS Class:

major

3'SS Sequence:

TTTGTTTGTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TGTTTTTTGTTT

Flanking Amino Acid:

AARILGPSKPAPSTYNPHKP

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

68.2

36.8

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

80.2

0.68

0.9

77.2

37.1

Minor 5ss

44.5

-0.6

3.1

62.7

43.1

Minor BPS

44.5

-0.3

3.4

74.33

37.3

Associated Gene:

Gene:

PROSER1

Ensembl Gene ID:

ENSAPLG00000003606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044115

196100901 - 196121422

20522

ENSAPLT00000003707

196100901 - 196118748

17848