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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196142164_196143186_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196142164 - 196143186

Intron Length:

1023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TCCATTTTATTT

Flanking Amino Acid:

NAILYDFYNPDRKCSVFYNA

Intron Amino Acid Position:

1509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

74.1

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

83.7

0.76

0.7

79.4

26.2

Minor 5ss

32.7

-2

3.1

37.9

40.9

Minor BPS

49.4

0.04

1.6

63.02

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022889

196135372 - 196181222

45851

ENSAPLT00000004236

196135372 - 196181222

45851

ENSAPLT00000031107

196135372 - 196181222

45851