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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196151601_196153032_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196151601 - 196153032

Intron Length:

1432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCATCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TACGTTTTACTT

Flanking Amino Acid:

HHPVLDRTMQGGIGTAEENL

Intron Amino Acid Position:

1112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

1.2

77.9

38.6

Major BPS

100

1.24

0.5

100

Major PPT

81.7

0.71

0.8

36.4

Minor 5ss

31.3

-2.1

2.9

41.4

Minor BPS

1.7

63.33

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004236

196135372 - 196181222

45851

ENSAPLT00000031107

196135372 - 196181222

45851