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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196153190_196153550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196153190 - 196153550

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATATAT

U12 Branch Point Sequence:

GTCAGCACAACT

Flanking Amino Acid:

GAFKSTPSSVWLTAFIVKVL

Intron Amino Acid Position:

1059

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

79.8

35.3

Major BPS

62.6

0.31

59.1

37.6

Major PPT

86.8

0.83

0.8

83.9

31.1

Minor 5ss

43.1

-0.8

2.9

54.5

43.9

Minor BPS

43.6

-0.4

2.2

62.98

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031107

196135372 - 196181222

45851

ENSAPLT00000022889

196135372 - 196181222

45851

ENSAPLT00000004236

196135372 - 196181222

45851