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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196160312_196160912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196160312 - 196160912

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGCTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTATCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

TTTTTTCTATCC

Flanking Amino Acid:

VQAVSISPEKGFCIADPHTF

Intron Amino Acid Position:

804

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

75.1

37.7

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

84.8

0.78

0.8

77.8

35.1

Minor 5ss

44.4

-0.6

3.2

64.2

47.3

Minor BPS

55.7

0.16

1.9

74.26

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031107

196135372 - 196181222

45851

ENSAPLT00000022889

196135372 - 196181222

45851

ENSAPLT00000004236

196135372 - 196181222

45851