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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196162983_196163344_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196162983 - 196163344

Intron Length:

362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAA

U12 Branch Point Sequence:

AGCGTCGTAACA

Flanking Amino Acid:

SDTIKSKVRERYTCLRATGR

Intron Amino Acid Position:

651

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

51.5

0.04

0.9

57.3

24.9

Major PPT

81.9

0.72

0.8

31.9

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

47.5

-0.1

2.1

57.43

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031107

196135372 - 196181222

45851

ENSAPLT00000022889

196135372 - 196181222

45851

ENSAPLT00000004236

196135372 - 196181222

45851