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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196171010_196174467_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196171010 - 196174467

Intron Length:

3458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TACTGATTAATC

Flanking Amino Acid:

NENFIFDIEAKHSYGKGIQG

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

35.3

Major BPS

74.5

0.61

79.6

29.1

Major PPT

69.4

0.44

70.3

Minor 5ss

-1.4

3.3

49.5

41.1

Minor BPS

51.7

0.03

64.46

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004236

196135372 - 196181222

45851

ENSAPLT00000031107

196135372 - 196181222

45851

ENSAPLT00000022889

196135372 - 196181222

45851