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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196177402_196178256_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196177402 - 196178256

Intron Length:

855

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTATCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTTTGTTATCT

Flanking Amino Acid:

NNYQEIKKLMVKPEFLQQDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

84.3

0.77

0.8

82.1

34.6

Minor 5ss

27.6

-2.6

3.9

Minor BPS

60.6

0.41

2.3

87.15

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031107

196135372 - 196181222

45851

ENSAPLT00000022889

196135372 - 196181222

45851

ENSAPLT00000004236

196135372 - 196181222

45851