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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196208782_196209943_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196208782 - 196209943

Intron Length:

1162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

GGCATGTTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

TTAAAGGTGACA

Flanking Amino Acid:

FHGLFVMSHLASSLTSMVMS

Intron Amino Acid Position:

2746

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

38.1

Major BPS

70.2

0.5

71.6

30.1

Major PPT

64.1

0.32

53.8

45.7

Minor 5ss

-0.3

2.8

56.2

Minor BPS

39.5

-0.8

2.6

56.83

42.2

Associated Gene:

Gene:

FREM2

Ensembl Gene ID:

ENSAPLG00000005184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005370

196200137 - 196322870

122734