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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196227116_196228748_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196227116 - 196228748

Intron Length:

1633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTCA

5'SS Class:

strong_major

3'SS Sequence:

ATTATGTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

TTATTTTTAGGT

Flanking Amino Acid:

SGEDYHPISEEIEFKEGETQ

Intron Amino Acid Position:

2294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.3

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

76.9

0.61

0.9

74.1

40.8

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

55.8

0.26

1.8

75.9

41.2

Associated Gene:

Gene:

FREM2

Ensembl Gene ID:

ENSAPLG00000005184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005370

196200137 - 196322870

122734