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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196627622_196628894_F

Intron Information:

Intron Rank:

133927

Intron Class:

major

Intron Phase:

Intron Coordinates:

196627622 - 196628894

Intron Length:

1273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTCAT

5'SS Class:

major

3'SS Sequence:

ATCACTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATATTTTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.2

68.8

43.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

73.3

0.53

69.3

Minor 5ss

-1.1

3.2

58.1

46.5

Minor BPS

69.2

0.68

1.3

80.13

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042371

196627522 - 196635841

8320