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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196689584_196696153_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196689584 - 196696153

Intron Length:

6570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

GGTTTCCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

GTTTCCTTACAG

Flanking Amino Acid:

NISSHSNIIFSNGGLDPWSA

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

67.7

0.44

38.9

Major PPT

80.4

0.68

0.9

37.5

Minor 5ss

38.4

-1.3

3.3

55.8

48.4

Minor BPS

63.1

0.27

1.8

69.63

43.2

Associated Gene:

Gene:

PRCP

Ensembl Gene ID:

ENSAPLG00000012966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025733

196688771 - 196717971

29201

ENSAPLT00000013507

196689375 - 196705856

16482