Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_196700918_196701999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196700918 - 196701999

Intron Length:

1082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTATGTATG

5'SS Class:

major

3'SS Sequence:

TTCCCCCAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTTCCCCCAACC

Flanking Amino Acid:

GDITWFCNNTGFMWDVAEEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

68.5

42.2

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

66.6

0.37

0.9

59.7

35.8

Minor 5ss

47.6

-0.2

2.5

65.2

Minor BPS

60.2

0.3

1.9

77.82

37.4

Associated Gene:

Gene:

PRCP

Ensembl Gene ID:

ENSAPLG00000012966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025733

196688771 - 196717971

29201

ENSAPLT00000013507

196689375 - 196705856

16482