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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196721390_196721509_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196721390 - 196721509

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAGTTA

5'SS Class:

major

3'SS Sequence:

GGTGTCACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAGAT

U12 Branch Point Sequence:

GTTGCTTAGATC

Flanking Amino Acid:

RFNCPKCGCTGNLQRCIEDF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

0.9

74.2

Major BPS

66.8

0.42

1.1

64.4

41.8

Major PPT

67.9

0.4

59.6

41.6

Minor 5ss

34.2

-1.8

3.4

46.2

49.1

Minor BPS

49.1

-0

1.8

61.39

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020064

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044230

196720304 - 196727690

7387