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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196820037_196820296_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196820037 - 196820296

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTAAATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTTTCTTAAAT

Flanking Amino Acid:

QINWFPLKPRTSTMALELEN

Intron Amino Acid Position:

758

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.4

32.4

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

78.7

0.65

0.9

74.9

38.5

Minor 5ss

40.1

-1.1

2.8

44.3

43.6

Minor BPS

84.8

1.17

1.1

97.05

26.9

Associated Gene:

Gene:

SYTL2

Ensembl Gene ID:

ENSAPLG00000011673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012246

196816814 - 196857804

40991

ENSAPLT00000046695

196815728 - 196857804

42077

ENSAPLT00000046608

196815728 - 196857804

42077

ENSAPLT00000027392

196816814 - 196857804

40991