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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196827404_196828584_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

196827404 - 196828584

Intron Length:

1181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATATC

5'SS Class:

strong_major

3'SS Sequence:

CTGCACTGAGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TGCTACTGAATG

Flanking Amino Acid:

KEELALSAEDGLKTDQDQER

Intron Amino Acid Position:

556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

80.3

32.2

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

59.5

0.22

1.1

54.7

39.8

Minor 5ss

39.8

-1.1

2.9

51.1

Minor BPS

52.6

-0

1.7

58.16

43.4

Associated Gene:

Gene:

SYTL2

Ensembl Gene ID:

ENSAPLG00000011673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046695

196815728 - 196857804

42077

ENSAPLT00000027392

196816814 - 196857804

40991