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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196876088_196877292_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

196876088 - 196877292

Intron Length:

1205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTCCTCCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGTT

U12 Branch Point Sequence:

TGTTTCTTCCTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

38.1

-0.7

4.3

71.4

45.1

Major PPT

76.3

0.59

0.8

73.6

31.5

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

43.5

-0.4

3.6

75.64

41.8

Associated Gene:

Gene:

CCDC83

Ensembl Gene ID:

ENSAPLG00000012173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012673

196875965 - 196894297

18333