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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196877408_196881192_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196877408 - 196881192

Intron Length:

3785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAGGTTTA

5'SS Class:

major

3'SS Sequence:

TCTTTCCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCTTTCTTTATT

Flanking Amino Acid:

YTFQKALLEFQIETKEAAID

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

69.1

38.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

78.5

0.64

0.8

74.2

29.5

Minor 5ss

44.6

-0.6

3.1

62.7

43.1

Minor BPS

0.68

1.6

83.03

38.5

Associated Gene:

Gene:

CCDC83

Ensembl Gene ID:

ENSAPLG00000012173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012673

196875965 - 196894297

18333