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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196884177_196886901_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196884177 - 196886901

Intron Length:

2725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTGAAG

Flanking Amino Acid:

EVKDDLHRATEYYRKALKAV

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

1.2

84.1

30.2

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

84.7

0.78

0.9

87.1

23.9

Minor 5ss

39.2

-1.2

2.8

46.3

Minor BPS

70.8

0.51

1.4

75.57

36.2

Associated Gene:

Gene:

CCDC83

Ensembl Gene ID:

ENSAPLG00000012173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012673

196875965 - 196894297

18333