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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196887929_196889878_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196887929 - 196889878

Intron Length:

1950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTATTGCCAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTATT

Flanking Amino Acid:

IEENEWLKEKVKVYRKEVRD

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

60.3

0.23

1.1

61.5

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

69.2

0.69

1.5

86.8

32.8

Associated Gene:

Gene:

CCDC83

Ensembl Gene ID:

ENSAPLG00000012173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012673

196875965 - 196894297

18333