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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196890001_196891044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196890001 - 196891044

Intron Length:

1044

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATTA

5'SS Class:

strong_major

3'SS Sequence:

CTTAATTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GTTTTCTTAATT

Flanking Amino Acid:

DGKLRNLKVPRHLCLTQAAG

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

80.2

28.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

78.4

0.64

0.9

72.5

37.3

Minor 5ss

40.9

-1

3.2

48.2

Minor BPS

84.3

1.15

0.9

92.31

29.9

Associated Gene:

Gene:

CCDC83

Ensembl Gene ID:

ENSAPLG00000012173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012673

196875965 - 196894297

18333