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Intron Name: Anas_platyrhynchos_platyrhynchos_1_19689455_19692868_R

Intron Information:

Intron Rank:

140779

Intron Class:

major

Intron Phase:

Intron Coordinates:

19689455 - 19692868

Intron Length:

3414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

GAAACTTCAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

26.3

Major BPS

81.6

0.78

0.8

24.9

Major PPT

93.2

0.97

0.6

92.2

18.2

Minor 5ss

36.1

-1.6

3.3

49.4

41.3

Minor BPS

55.7

0.26

1.6

68.48

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036007

19687739 - 19712795

25057

ENSAPLT00000026641

19684628 - 19692988

8361