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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196907686_196909864_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196907686 - 196909864

Intron Length:

2179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

TTTGTCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

CCTCCTCTAATT

Flanking Amino Acid:

TLNGMHFPQYAPPVMAYPAT

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

1.3

77.6

32.8

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

0.79

0.7

82.1

29.9

Minor 5ss

33.4

-1.9

3.2

39.2

39.9

Minor BPS

54.2

0.21

1.7

69.5

42.1

Associated Gene:

Gene:

PICALM

Ensembl Gene ID:

ENSAPLG00000012265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023036

196902197 - 196964330

62134

ENSAPLT00000022814

196902197 - 196964330

62134

ENSAPLT00000030578

196901268 - 196964330

63063

ENSAPLT00000025001

196902197 - 196964330

62134