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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196913140_196915616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196913140 - 196915616

Intron Length:

2477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

AAAACATTAAAC

Flanking Amino Acid:

EPSSVAGLFGGFTPSPVAQP

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

Major BPS

70.2

0.5

71.6

30.1

Major PPT

85.9

0.81

0.7

24.3

Minor 5ss

-1.6

3.1

50.1

46.4

Minor BPS

50.1

-0

1.7

59.18

38.3

Associated Gene:

Gene:

PICALM

Ensembl Gene ID:

ENSAPLG00000012265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012854

196902197 - 196964330

62134

ENSAPLT00000030578

196901268 - 196964330

63063

ENSAPLT00000025001

196902197 - 196964330

62134

ENSAPLT00000023036

196902197 - 196964330

62134