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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196915698_196922636_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196915698 - 196922636

Intron Length:

6939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

CATGCCTTATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAT

U12 Branch Point Sequence:

CATGCCTTATCA

Flanking Amino Acid:

AAPQVGSTWGDSFCGPQAYP

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

25.3

Major BPS

47.8

-0.1

1.6

58.2

48.3

Major PPT

69.3

0.43

66.7

Minor 5ss

-1.3

3.1

51.9

44.9

Minor BPS

60.4

0.32

1.8

68.22

44.2

Associated Gene:

Gene:

PICALM

Ensembl Gene ID:

ENSAPLG00000012265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025001

196902197 - 196964330

62134