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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196925008_196925345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196925008 - 196925345

Intron Length:

338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TGTTTCTGGATT

Flanking Amino Acid:

EEQARLKALKEQRLKELAKK

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.8

87.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

72.4

0.51

0.9

33.5

Minor 5ss

-0.8

2.9

57.2

47.1

Minor BPS

64.4

0.53

1.4

80.04

35.8

Associated Gene:

Gene:

PICALM

Ensembl Gene ID:

ENSAPLG00000012265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023036

196902197 - 196964330

62134

ENSAPLT00000022814

196902197 - 196964330

62134

ENSAPLT00000012854

196902197 - 196964330

62134

ENSAPLT00000030578

196901268 - 196964330

63063

ENSAPLT00000025001

196902197 - 196964330

62134