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Intron Name: Anas_platyrhynchos_platyrhynchos_1_196925470_196926706_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196925470 - 196926706

Intron Length:

1237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCTTATG

5'SS Class:

major

3'SS Sequence:

CCAATTACTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

CTATTAACAACC

Flanking Amino Acid:

KKIKDSTAASRATTLSNAVS

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

70.9

40.8

Major BPS

81.9

0.79

0.8

81.9

Major PPT

70.4

0.46

0.9

66.4

39.1

Minor 5ss

32.9

-2

42.2

44.5

Minor BPS

44.5

-0.4

57.53

40.6

Associated Gene:

Gene:

PICALM

Ensembl Gene ID:

ENSAPLG00000012265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022814

196902197 - 196964330

62134

ENSAPLT00000012854

196902197 - 196964330

62134

ENSAPLT00000030578

196901268 - 196964330

63063

ENSAPLT00000025001

196902197 - 196964330

62134

ENSAPLT00000023036

196902197 - 196964330

62134